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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015846301.1_cds_XP_016509587.1_22508
CDS Infomation

[gene=LOC107827043] [db_xref=GeneID:107827043] [protein=respiratory burst oxidase homolog protein E-like isoform X2] [protein_id=XP_016509587.1] [location=join(130..748,1046..1208,1901..1949,2749..2862,3503..3925,4005..4388,4489..4584,4806..4921,5000..5170,5253..5338,5498..5511)] [gbkey=CDS]
Sequence

ATGCAGCTGATGTCATTTTTAAGGTCATCTCCTACCAGCTCAAAGCGATCCAGTTACAAC
CGGAACTTTGACATGCCAGAGGATTCTACGGCGGAAACGTCGGAGCATGTTGGTGGCGCA
ATGTTGCCGATTTTCCTCAACGATTTACAGAGAAACAACGACAAAGACATAGTTGAGGTC
AGGCTAGAACTTGATGATAATTCCATTGTTTTGTGTAGCGTAACACCAACTCCACCGCAC
AATACCAATGTTGCTGCTGGGGAAGAAGAACATTCTCCCAGCGGAATTCCATCGAACAGC
ACGTATGCATCTGCCATCGCTTCTAGAATTTGCCGGAAATTCCAGTGGCTGAGATCACCG
GGAAGGGATGATCACCATCAGTTTCATGGCAACCAGCTGATGACGACGAATTTATCGGCG
GCACGAGAGGAGATGAAATCGAAATTGCAGGTGGAGAGGAATAAACCGAGTGCTGGATGC
GCGCTTGGAGGGTTGAGATTTATAAGCAAGAGCACGAGAGAATCTGACATTAATGAGCTT
TGGGGAAAAGTTGAGACGCGCTTCGATGCTTTGGCCAAGGATGGTTTGCTCTCTAGAGAA
GATTTCGGTGAATGCATTGGAATGGAGGATTCAAAAGAGTTTGCAGTGGGGATTTTTAAT
GCATTGGAGCGACGACGACGGAGACAAAAGACGGCAAAAATAAATAAAGCAGAGCTTCAC
GAATTTTGGTTGCAAATTTCGGACCAAAGCTTTGACGCTCGACTTCAGATTTTCTTTGAC
ATGGCTGATAGCAATGGAGATGGGAGAATCACGAGAGAAGAAGTTCAAGAGCTGATAATG
CTGAGTGCTTCAGTAAATAAGCTCTCCAGATTGAAGGAATGTGCAGCAGAGTATGCTTCT
TTAATAATGGAGGAATTAGACCCAGAAGGTCTCGGTTACATTGAGTTATGGCAGTTGGAA
ACACTTCTTCTACAAAGGGACAACTACATGAGCTACAGCAGACCTTTAAGCACAACAACC
CTTGAATGGAGTCAGAACCTAGGAATCAGCAAGACCAACATCATAGTAAAGAAAGCAAGT
TGTGCCCTCAAATGCCTTGTCTTAGATAACTGGCAGAGGGGCTGGATTCTGCTGCTATGG
TTGTCGGTGATGACTGCACTATTCACTTGGAAATTCTTGCAGTATAGGCAAATGGCAGCA
TTTCAAGTTATGGGTTACTGCTTGGCAACAGCTAAAGGAGCTGCCGAGACTCTCAAGTTT
AACATGGCACTAATCCTTTTACCAGTTTGTCGAAACATATTAACTAGGTTACGGTCAACA
AGAGCCAGGATACTTATTCCATTTGATGACAACATCAATTTTCACAAGATTATTGCACAT
GCCATAGCTGTTGGCATAATACTTCATGCAGCCAACCATTTAGCGTGTGATTTTCCCCAT
CTGGTTAACTCATCGCCAGAAAAATTTGCACTCGTAGCTTCTGATTTTGACAAGTTAAAG
CCAACTTACAGAAGCCTTTTGATTGGTGTTGAAGGCATAACTGGTATTTCTATGGTAACG
TTGATGACTATAGCCTTCACACTGGCAACACGACGCTTCAGGAGGAGCATACTGAAGCTA
CCACCCCCCCTGAACCGATTAACGGGCTTCAACGCATTTTGGTATTCTCACCACCTTCTG
GCATTGGTCTACGTATTGCTAATACTACATGGAACATTCCTGTTCTTTGTCCACAAATGG
TATCAGAAAACGACATGGATGTATATCTCCATTCCCTTAATCCTCTACATTGCAGAGAGG
AGTTTGAGAATATGGCGTTCAGAAGACTATGCAGTTAAGATCTTGAAGGTTTCTGTACTT
CCAGGAGATCTCTTAAGCTTGATCATGTCAAAACCAGAAGGCTTCAAATACAAGAGCGGC
CAGTACATATTCCTGCAGTGCCCAACAATATCCTCATTTGAATGGCATCCATTTTCTATA
ACATCCGCACCAGGAGACAACTATCTCAGTGTTCACATCCGAATTGTAGGTGACTGGACA
AAAGAACTTAAGAGGGTATTCACAGAGGATAGAAGTTCAGCATGTGTAGTTGGTCGAGCA
AAGTTTAATGAACATGAAAATGTTGATCAAAGAGGCTTACCTCGAATGCTAGTCGATGGA
CCCTATGGTGCCCCAGCACAAGACTATCAAAATTATGATGCCTTGCTTCTTGTAGGACTT
GGATTTGAATACTGA

Peptide Sequence

PEP ID

XP_016509587.1
PEP Infomation

PREDICTED: respiratory burst oxidase homolog protein E-like isoform X2 [Nicotiana tabacum]
Sequence

MQLMSFLRSSPTSSKRSSYNRNFDMPEDSTAETSEHVGGAMLPIFLNDLQRNNDKDIVEV
RLELDDNSIVLCSVTPTPPHNTNVAAGEEEHSPSGIPSNSTYASAIASRICRKFQWLRSP
GRDDHHQFHGNQLMTTNLSAAREEMKSKLQVERNKPSAGCALGGLRFISKSTRESDINEL
WGKVETRFDALAKDGLLSREDFGECIGMEDSKEFAVGIFNALERRRRRQKTAKINKAELH
EFWLQISDQSFDARLQIFFDMADSNGDGRITREEVQELIMLSASVNKLSRLKECAAEYAS
LIMEELDPEGLGYIELWQLETLLLQRDNYMSYSRPLSTTTLEWSQNLGISKTNIIVKKAS
CALKCLVLDNWQRGWILLLWLSVMTALFTWKFLQYRQMAAFQVMGYCLATAKGAAETLKF
NMALILLPVCRNILTRLRSTRARILIPFDDNINFHKIIAHAIAVGIILHAANHLACDFPH
LVNSSPEKFALVASDFDKLKPTYRSLLIGVEGITGISMVTLMTIAFTLATRRFRRSILKL
PPPLNRLTGFNAFWYSHHLLALVYVLLILHGTFLFFVHKWYQKTTWMYISIPLILYIAER
SLRIWRSEDYAVKILKVSVLPGDLLSLIMSKPEGFKYKSGQYIFLQCPTISSFEWHPFSI
TSAPGDNYLSVHIRIVGDWTKELKRVFTEDRSSACVVGRAKFNEHENVDQRGLPRMLVDG
PYGAPAQDYQNYDALLLVGLGFEY

Transcript Sequence

Gene sequence data has not been registered.